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五周年,102个工具都降价了

reportradar




choosefile *  example


choosefile *  example




Task switching


Parameter switching

=

Global modification


Color modification


Graphics download



1. Functions

The radar chart is used to show the results of significant data differences between the two comparison groups.

2. Scope of application

Applicable to transcriptome, metabolome, protein, 16S, etc. All data suitable for comparison between the two groups.

3. Input

1) Matrix file: only the abundance data of each sample in the two comparison groups can be input. The table needs to include the difference multiple, P value and FDR value between the comparison groups. If there is no FDR value, NA can be input. For example, the following table shows gene expression data, difference multiple, P value and FDR value between the comparison groups.

id A1 A2 B1 B2 log2(fc) PValue FDR
ENSG00000169213 45.41 48.02 0.21 0.21 -7.80 3.17E-187 5.07E-183
ENSG00000163661 469.72 613.75 1.73 1.66 -8.32 1.27E-169 1.02E-165
ENSG00000104332 195.49 210.42 0.06 0.1 -11.31 8.77E-169 4.68E-165
ENSG00000122862 253.95 201.5 0.47 0.52 -8.85 1.97E-127 7.86E-124
ENSG00000046604 1.01 0.88 96.36 105.48 6.74 1.85E-126 5.92E-123
ENSG00000154277 702.77 559.23 0.63 0.3 -10.41 2.07E-125 5.52E-122
ENSG00000106333 131.87 120.58 1.19 1.24 -6.70 6.52E-125 1.49E-121
ENSG00000184916 0.14 0.12 32.77 34.12 8.01 1.06E-124 2.12E-121

2) Grouping file: it is the grouping information of the first row of the matrix. For example, when the sample name of the first row of the matrix is used, each sample can be divided into several、 groups or not according to the actual situation. The input files are as follows.

A1

A

A2

A

B1

B

B2

B

3) Upload file format description: Data and data must be separated by tab characters. You can choose to open it in Excel and save it as a. txt file separated by tab keys.

4. Parameter switching

1) The radar chart can be displayed by switching the maximum difference multiple, minimum P value and minimum Q value

2) The number of displays can be adjusted to a maximum of 30.

5. Parameter adjustment

1) Legend Location: Select the location of the legend.

2) Abundance precision: the precision of abundance data on radar map (accurate to several decimal places).

3) Name: whether the data name is displayed.

4)abundance of A: Set the color of the abundance line chart of comparison group A.

5)abundance of B: Set the color of the abundance line chart of comparison group B.

6) Color modification: change the graphic color matching to provide 3 classic color matching.

6. Output

The program will output radar chart according to default parameters. Users can adjust the parameters according to personal requirements and provide SVG and PNG format files for download.

Results Display      (Click " task ID" to view different analysis results)