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本帖最后由 hld8124 于 2016.12.21 21:31 编辑
Protein Databases
Protein Sequence Databases - Protein Structure Databases - Protein Domains, Motifs and Signatures - Others
Protein Sequence Databases: | Antibodies: Sequence and Structure
BRENDA: Enzyme database
CD Antigens: Database of CD antigens
dbCFC: Cytokine family database
Histons: Histone sequence database
HPRD: Human protein reference database
InterPro: Intergrated documentation 5resources for protein families
iProClass: An integrated protein classification database
KIND: A non-redundant protein sequence database
MHCPEP: Database of MHC binding peptides
MIPS: Munich information centre for protein sequences
PIR: Annotated, and non-redundant protein sequence database
PIR-ALN: Curated database of protein sequence alignments
PIR-NREF: PIR nonredundent reference protein database
PMD: Protein mutant database
PRF: Protein research foundation, Japan
ProClass: Non-redundant protein database
ProtoMap: Hierarchical classification of swissprot proteins
REBASE: Restriction enzyme database
RefSeq: Reference sequence database at NCBI
SwissProt: Curated protein sequence database
SPTR: Comprehensive protein sequence database
Transfac: Transcription factor database
TrEMBL: Annotated translations of EMBL nucleotide sequences
Tumor gene database: Genes with cancer-causing mutations
[url=http://bmerc-www.bu.edu/wdrepeat/]WD repeats:[/url] WD-repeat family of proteins
| Protein Structure Databases: | Cath: Protein structure classification
HIV Protease: HIV protease database 3D structure
PDB: 3-D macromolecular structure data
PSI: Protein structure initiative
S2F: Structure to function project
Scop: Structural Classification of Proteins
Protein Domains, Motifs & Signatures: | BLOCKS: Multipe aligned segments of conserved protein regions
CCD: Conserved domain database and search service
DOMO: Homologous protein domain families
Pfam: Database of protein domains and HMMs
ProDom: Protein domain database
Prints: Protein motif fingerprint database
Prosite: Database of protein families and domains
SMART: Simple modular architecture research tool
TIGRFAM: Protein families based on HMMs
Phospho Site: Database of phosphorylation sites |
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